loki2.inference.cli
===================

.. py:module:: loki2.inference.cli

.. autoapi-nested-parse::

   CLI for Loki2 cell inference.

   This module provides command-line argument parsers for WSI inference
   operations, supporting both in-memory and disk-based processing.







Module Contents
---------------

.. py:function:: parse_wsi_properties(wsi_properties_str: str) -> Dict[str, Any]

   Parse WSI properties from a JSON string.

   :param wsi_properties_str: JSON string containing WSI metadata
                              (e.g., slide_mpp, magnification).

   :returns: Parsed WSI properties dictionary.
   :rtype: Dict[str, Any]

   :raises argparse.ArgumentTypeError: If the JSON string is invalid.


.. py:class:: InferenceWSIParser

   Parser for in-memory WSI inference calculation.

   This parser handles command-line arguments for processing WSI files
   using in-memory inference, supporting both single file and batch processing.


   .. py:attribute:: parser


   .. py:attribute:: requiredNamed


   .. py:attribute:: group_classifier


   .. py:attribute:: subparsers


   .. py:attribute:: subparser_wsi


   .. py:attribute:: subparser_dataset


   .. py:attribute:: group


   .. py:method:: parse_arguments() -> dict